WebMar 12, 2024 · Background Hi-C is a molecular biology technique to understand the genome spatial structure. However, data obtained from Hi-C experiments is biased. Therefore, several methods have been developed to model Hi-C data and identify significant interactions. Each method receives its own Hi-C data structure and only work on specific … Webinst/doc/fithic.R defines the following functions: rdrr.io Find an R package R language docs Run R in your browser. FitHiC Confidence estimation for intra-chromosomal contact maps. Package index. Search the FitHiC package. Vignettes. README.md How to …
GitHub - RuyuTan/FitHiC: Fit-Hi-C is a tool for assigning …
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WebPackage ‘FitHiC’ March 20, 2024 Type Package Title Confidence estimation for intra-chromosomal contact maps Version 1.24.0 Date 2024-04-12 Description Fit-Hi-C is a tool for assigning statistical confidence estimates WebNov 8, 2024 · In FitHiC: Confidence estimation for intra-chromosomal contact maps Introduction. Fit-Hi-C is a tool for assigning statistical confidence estimates to intra … WebEstimates both tail area-based false discovery rates (Fdr) as well as local false discovery rates (fdr) for a variety of null models (p-values, z-scores, correlation coefficients, t-scores). The proportion of null values and the parameters of the null distribution are adaptively estimated from the data. In addition, the package contains functions for non-parametric … list of sic codes companies house